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Re: iTunes question

As long as all the music that you have on your iPhone is also on your PC and is showing up in your iTunes library there should be no issues at all. Even if all content got deleted from your iPhone when synching your iBooks, it should all still be on your PC and you can get it back on the phone with the next sync.

If your iBooks are on another PC and iTunes than your music, then it is a different story...

Marcus